Mattress stitch is the best way to seam the sides. Just cut a long enough length of yarn..I'm not sure of the length to seam ratio so be generous and then leaving a 6 in tail do the seam. You can weave in the ends later. No need to knot.
Scroll down till you get to finishing techniques.
http://www.knittinghelp.com/videos/knitting-tips
This is the method I use for weaving in the ends.
http://www.knitty.com/ISSUEfall04/FEATfall04TT.html